[Devel] [GIT] OpenBioMaps GIT repository, branch master_3.0 updated: reorganising obm 3.0
git at vocs.unideb.hu
git at vocs.unideb.hu
Thu Dec 13 10:37:46 CET 2018
The project "OpenBioMaps GIT repository":
The branch, master_3.0 has been updated
via 0e05e5624ce53e1dc5b5355854b1595ea4882be7 (commit)
from 226cdc35c05833c2ebaced9d76746129794e062e (commit)
- Log -----------------------------------------------------------------
commit 0e05e5624ce53e1dc5b5355854b1595ea4882be7
Author: Bán Miklós <banm at vocs.unideb.hu>
Date: Thu Dec 13 10:37:21 2018 +0100
reorganising obm 3.0
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Summary of changes:
.htaccess | 23 +-
{templates/initial/css/pure => css}/pure-min.css | 0
gekko_index.php | 42 +-
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.../html/biomaps/projects/sablon}/oauth/token.php | 0
.../var/www/html/biomaps/projects/sablon/pds.php | 9 +
.../html/biomaps/projects/sablon/pds}/.htaccess | 0
.../biomaps/projects/sablon}/pds/pds_class.php | 0
.../biomaps/projects/sablon}/pds/pds_funcs.php | 0
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.../biomaps/projects}/sablon/shiny/run_server.R | 0
.../html/biomaps/projects}/sablon/shiny/server.R | 0
.../html/biomaps/projects}/sablon/shiny/style.css | 0
.../www/html/biomaps/projects}/sablon/shiny/ui.R | 0
.../server_init}/var/www/html/biomaps/robots.txt | 0
.../server_init/var/www/html/biomaps/server.html | 6 +
.../var/www/html/biomaps/supervisor.php | 1141 ++
supervisor.php | 352 +-
templates/initial/includes/common_pg_funcs.php | 6329 -------
templates/initial/root/header.php.inc | 54 -
templates/initial/root/index.php | 884 -
templates/initial/root/pds.php | 7 -
templates/sablon/header.php.inc | 54 -
templates/sablon/includes/main.js.php | 227 -
templates/sablon/includes/update_taxonc.php | 201 -
templates/sablon/includes/upload.php | 637 -
templates/sablon/index.php | 881 -
templates/sablon/js/functions.js | 1559 --
templates/sablon/pds.php | 8 -
templates/var/www/html/biomaps/.htaccess | 63 -
templates/var/www/html/biomaps/at.html | 328 -
templates/var/www/html/biomaps/common_pg_funcs.php | 78 -
templates/var/www/html/biomaps/index.php | 358 -
templates/var/www/html/biomaps/js/jquery-ui.min.js | 413 -
templates/var/www/html/biomaps/prepare_vars.php | 134 -
templates/var/www/html/biomaps/server.html | 6 -
7318 files changed, 68956 insertions(+), 12369 deletions(-)
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rename {Images => img}/rajzszeg.png (100%)
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copy {Images => img}/zoom-plus-mini.png (100%)
copy {Images => img}/zoom-world-mini.png (100%)
copy {Images => img}/zoombar.png (100%)
copy prepare_vars.php => init.php (100%)
create mode 100644 js/datetimepicker/.travis.yml
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create mode 100644 js/datetimepicker/README.md
create mode 100644 js/datetimepicker/bower.json
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create mode 100644 js/datetimepicker/tests/tests/methods.js
create mode 100644 js/datetimepicker/tests/tests/options.js
create mode 100644 js/ui/AUTHORS.txt
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create mode 100644 js/ui/jquery-ui.js
create mode 100644 js/ui/jquery-ui.min.css
create mode 100644 js/ui/jquery-ui.min.js
create mode 100644 js/ui/jquery-ui.structure.css
create mode 100644 js/ui/jquery-ui.structure.min.css
create mode 100644 js/ui/jquery-ui.theme.css
create mode 100644 js/ui/jquery-ui.theme.min.css
create mode 100644 js/ui/package.json
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rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/Storage/Mongo.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/Storage/MongoDB.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/Storage/Pdo.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/Storage/Pdo.php__ (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/Storage/PublicKeyInterface.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/Storage/Redis.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/Storage/RefreshTokenInterface.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/Storage/ScopeInterface.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/Storage/UserCredentialsInterface.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/TokenType/Bearer.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/TokenType/Mac.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/src/OAuth2/TokenType/TokenTypeInterface.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/AutoloadTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Controller/AuthorizeControllerTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Controller/ResourceControllerTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Controller/TokenControllerTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Encryption/FirebaseJwtTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Encryption/JwtTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/GrantType/AuthorizationCodeTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/GrantType/ClientCredentialsTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/GrantType/ImplicitTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/GrantType/JwtBearerTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/GrantType/RefreshTokenTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/GrantType/UserCredentialsTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/OpenID/Controller/AuthorizeControllerTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/OpenID/Controller/UserInfoControllerTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/OpenID/GrantType/AuthorizationCodeTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/OpenID/ResponseType/CodeIdTokenTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/OpenID/ResponseType/IdTokenTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/OpenID/ResponseType/IdTokenTokenTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/OpenID/Storage/AuthorizationCodeTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/OpenID/Storage/UserClaimsTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/RequestTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/ResponseTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/ResponseType/AccessTokenTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/ResponseType/JwtAccessTokenTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/ScopeTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/ServerTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/AccessTokenTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/AuthorizationCodeTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/ClientCredentialsTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/ClientTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/DynamoDBTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/JwtAccessTokenTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/JwtBearerTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/PdoTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/PublicKeyTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/RefreshTokenTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/ScopeTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/Storage/UserCredentialsTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/OAuth2/TokenType/BearerTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/bootstrap.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/cleanup.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/config/keys/id_rsa (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/config/keys/id_rsa.pub (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/config/storage.json (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/lib/OAuth2/Request/TestRequest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/lib/OAuth2/Storage/BaseTest.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/lib/OAuth2/Storage/Bootstrap.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/oauth2-server-php/test/lib/OAuth2/Storage/NullStorage.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/resource.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/server.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/oauth/token.php (100%)
create mode 100644 resources/templates/server_init/var/www/html/biomaps/projects/sablon/pds.php
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects/sablon/pds}/.htaccess (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/pds/pds_class.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/pds/pds_funcs.php (100%)
rename {templates/initial => resources/templates/server_init/var/www/html/biomaps/projects/sablon}/pds/service.php (100%)
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects}/sablon/private/.htaccess (100%)
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects}/sablon/private/.htaccess_nop (100%)
rename {templates/sablon/public => resources/templates/server_init/var/www/html/biomaps/projects/sablon/private}/cache.php (100%)
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects}/sablon/private/private.map (100%)
rename {templates/sablon/public => resources/templates/server_init/var/www/html/biomaps/projects/sablon/private}/proxy.php (100%)
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects}/sablon/public/.htaccess (100%)
rename {templates/initial/includes => resources/templates/server_init/var/www/html/biomaps/projects/sablon/public}/cache.php (100%)
rename {templates/initial/includes => resources/templates/server_init/var/www/html/biomaps/projects/sablon/public}/proxy.php (100%)
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects}/sablon/public/public.map (100%)
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects}/sablon/shiny/r-server.log (100%)
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects}/sablon/shiny/run_server.R (100%)
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects}/sablon/shiny/server.R (100%)
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects}/sablon/shiny/style.css (100%)
rename {templates => resources/templates/server_init/var/www/html/biomaps/projects}/sablon/shiny/ui.R (100%)
rename {templates => resources/templates/server_init}/var/www/html/biomaps/robots.txt (100%)
create mode 100644 resources/templates/server_init/var/www/html/biomaps/server.html
create mode 100644 resources/templates/server_init/var/www/html/biomaps/supervisor.php
delete mode 100644 templates/initial/includes/common_pg_funcs.php
delete mode 100644 templates/initial/root/header.php.inc
delete mode 100644 templates/initial/root/index.php
delete mode 100644 templates/initial/root/pds.php
delete mode 100644 templates/sablon/header.php.inc
delete mode 100644 templates/sablon/includes/main.js.php
delete mode 100644 templates/sablon/includes/update_taxonc.php
delete mode 100644 templates/sablon/includes/upload.php
delete mode 100644 templates/sablon/index.php
delete mode 100644 templates/sablon/js/functions.js
delete mode 100644 templates/sablon/pds.php
delete mode 100644 templates/var/www/html/biomaps/.htaccess
delete mode 100644 templates/var/www/html/biomaps/at.html
delete mode 100644 templates/var/www/html/biomaps/common_pg_funcs.php
delete mode 100644 templates/var/www/html/biomaps/index.php
delete mode 100644 templates/var/www/html/biomaps/js/jquery-ui.min.js
delete mode 100644 templates/var/www/html/biomaps/prepare_vars.php
delete mode 100644 templates/var/www/html/biomaps/server.html
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